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Publications


    2008

  1. A. Santamaria-Pang, T.S. Bildea, S. Tan, and I.A. Kakadiaris, "Denoising for 3D Photonlimited Imaging data using non-separable fil lterbanks," IEEE Transactions on Image Processing, 2008.
  2. I.A. Kakadiaris, A. Santamaria, C. Colbert, P. Saggau, "Morphological Reconstruction of Living Neurons" Microscopic Image Analysis for Life Science Applications, Eds. J. Rittscher, R. Machiraju, and S.T.C. Wong, 2008.
  3. S. Tan, L. Jiao, and I.A. Kakadiaris. ”Wavelet-based Bayesian image estimation: from marginal and bivariate prior models to multivariate prior models”. IEEE Transactions on Image Processing, 2008 (In Press).
  4. A. Santamaria-Pang, T.S. Bildea, S. Tan, and I.A. Kakadiaris. ”Denoising for 3D Photon-limited Imaging data based on on-separable filterbanks”. IEEE Transactions on Image Processing, 2008 (In Press).
  5. I.A. Kakadiaris, A. Santamaria, C. Colbert, P. Saggau. ”Morphological Reconstruction of Living Neurons” Microscopic Image Analysis for Life Science Applications, Eds. J. Rittscher, R. Machiraju, and S.T.C. Wong, 2008 (In Press).

    6. 2007

  6. A. Santamaria-Pang and C.M. Colbert and P. Saggau and I.A. Kakadiaris. "Automatic centerline extraction of irregular tubular structures using probability volumes from confocal imaging". Proc. Medical Image Computing and Computer-Assisted Intervention, Brisbane, Australia, Oct 29 - Nov 2, 2007. (2)486-494
  7. A. Santamaria-Pang, C.M. Colbert, B. Losavio, P. Saggau, and I.A. Kakadiaris. ”Automatic Morphological Reconstruction of Neurons from Optical Images”. Proc. Second International Workshop in Microscopic Image Analysis with Applications in Biology, Piscataway, NJ, September 21, 2007.

    8. 2006

  8. A. Santamaria-Pang, T.S. Bildea, C. Colbert, P. Saggau and I.A. Kakadiaris. "Learning 3D generalized cylindrical models by examples with Support Vector Machines: An application to Confocal Imaging". Proc. MICCAI Workshop in Microscopic Image Analysis and Applications in Biology (MIAAB), Denmark, Copenhagen, October 1-6, 2006.
  9. B.E. Losavio, G.D. Reddy, C.M. Colbert, I.A. Kakadiaris, and P. Saggau. "Combining Optical Imaging and Computational Modeling to Analyze Structure and Function of Living Neurons" Proc. 28th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, New York, NY, August 30-September 3, 2006.
  10. L. Shen, M. Papadakis, I.A. Kakadiaris, I. Konstantinidis, D.J. Kouri, and D.K. Hoffman. "Image denoising using a tight frame". IEEE Transactions on Image Processing, 15(5):1254-1263, May 2006.
  11. S. Urban, S.M. O'Malley, B. Walsh, A. Santamaria-Pang, P. Saggau, C. Colbert, and I.A. Kakadiaris. "Automatic reconstruction of dendrite morphology from optical section stacks". Proc. 2nd International Workshop on Computer Vision Approaches to Medical Image Analysis, pp. 190-201, Graz, Austria, May 2006.
  12. A. Santamaría-Pang, T.S. Bildea, I. Konstantinidis, and I.A. Kakadiaris. Adaptive frames-based denoising of confocal microscopy data. Proc. IEEE International Conference on Acoustics, Speech, and Signal Processing, Toulouse, France, May 14-19, 2006.

    13. 2005

  13. I. Konstantinidis, A. Santamaria-Pang, and I.A. Kakadiaris. "Frames-based denoising in 3D confocal microscopy imaging". Proc. 27th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Shanghai, China, September 1-4, 2005.
  14. L. Shen, M. Papadakis, I.A. Kakadiaris, I. Konstantinidis, D.J. Kouri, and D.K. Hoffman. "Image denoising using a tight frame". Proc. IEEE International Conference on Acoustics, Speech, and Signal Processing, II:641-644, Philadelphia, PA, March 18-23 2005.

    15. 2004

  15. L. Shen, J. Yang, M. Papadakis, I.A. Kakadiaris, D.J. Kouri, and D.K. Hoffman. "Orthonormal wavelets arising from HDAFs". Contemporary Mathematics, AMS, 345:317-342, 2004.
  16. S. Urban, S. O'Malley, B. Walsh, B. Losavio, T. Hoogland, P. Saggau, C. Colbert, and I.A. Kakadiaris. "Automatic reconstruction of dendrite morphologies from confocal images" Proc. Texas Systems Day, pp. 25, Houston, TX, Nov. 13 2004.
  17. C. Uehara, C.M. Colbert, P. Saggau and I.A. Kakadiaris. "Towards Automatic Reconstruction of Dendrite Morphology from Live Neurons". Proc. 26th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, San Fransisco, CA, September 1-5, 2004.

    18. 2003

  18. E. Papadakis, G. Gogoshin, I.A. Kakadiaris, D.J. Kouri and D.K. Hoffman. "Non-separable Radial Frame Multiresolution Analysis in Multidimensions". Numerical Functional Analysis and Optimization, 24(7-8):907-928, November - December 2003. <PDF>
  19. L. Shen, J. Yang, M. Papadakis, I.A. Kakadiaris, D.J. Kouri, and D.K. Hoffman. "On the smoothness of the modified hermite distributed approximating functional orthonormal wavelets". Applied and Computational Harmonic Analysis, 15(3):242-254, Nov. 2003.